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General Surgery

Pilonidal Cyst Surgery in Queens, NY

A pilonidal cyst is a pocket under the skin at the top of the crease between the buttocks, often containing hair and skin debris. It can become infected and form a painful abscess, and it often comes back without definitive treatment.

Medically reviewed by Anna Arsenous, M.D., board-certified general surgeon
Last reviewed September 24, 2026
At a Glance
LocationTop of the buttock crease, near the tailbone
Most common inYoung adults, especially men
Acute treatmentIncision and drainage
Definitive treatmentExcision
CoverageCommonly covered by insurance

Symptoms

  • Pain and swelling at the top of the buttock crease
  • Redness and warmth over the area
  • Pus or blood draining from small openings in the skin
  • Fever in some infections
  • Repeated flare-ups over months or years

Treating an infected pilonidal cyst

An acute abscess is treated by opening and draining it, usually under local anesthesia in the office. This gives rapid pain relief. Antibiotics are sometimes added. Drainage alone often does not prevent future flare-ups.

When to seek urgent care

Call the office or seek care promptly for a rapidly enlarging, very painful swelling, spreading redness or fever.

Talk with Dr. Arsenous about your options.

Surgery for recurrent disease

For cysts that keep coming back, the tract and surrounding diseased tissue are removed. Depending on the extent, the wound may be closed with stitches, closed off to the side of the midline to improve healing, or left open to heal gradually from the inside. Dr. Arsenous will explain the options, the trade-offs in healing time and recurrence, and what wound care each involves.

Recovery and prevention

Recovery depends on the technique. Closed wounds often heal in a few weeks; open wounds take longer and need regular dressing changes. Keeping the area clean and dry and removing hair from the area, for example with laser hair removal, helps lower the chance of recurrence.

Frequently asked questions

Can a pilonidal cyst go away on its own?

Symptoms can settle between flare-ups, but the underlying pocket usually remains and often flares again.

How long does recovery take?

From a couple of weeks for a closed wound to several weeks or more for a wound left open to heal.

Will I be able to sit after surgery?

Sitting is uncomfortable at first. A cushion helps, and most people can sit normally within a couple of weeks.

Does hair removal really help?

Removing hair in the area reduces one of the main causes of recurrence and is often recommended after treatment.

Can I go back to school or work quickly?

Many people return to desk activities within a week or two, depending on the procedure and wound care.

Have questions about pilonidal cyst surgery?

Every treatment plan is individual. Dr. Arsenous will review your condition, explain your options and what recovery looks like for you.

This page is general information and is not a substitute for medical advice. For a medical emergency, call 911.